Index

B

backward() (scmg.model.manifold_generation.ConditionalDiffusionModel method)

C

calc_causal_scores() (scmg.model.causal_prediction.CausalGenePredictor method) CausalGenePredictor (class in scmg.model.causal_prediction)

CellTypeSearcher (class in scmg.model.cell_type_search) ConditionalDiffusionModel (class in scmg.model.manifold_generation)

F

forward() (scmg.model.basic.MLP method) (scmg.model.manifold_generation.ConditionalDiffusionModel method) (scmg.model.manifold_generation.MLPDenoiser method) (scmg.model.manifold_generation.RecurrentBlock method)

G

generate() (scmg.model.manifold_generation.ConditionalDiffusionModel method)

generate_cells() (in module scmg.model.manifold_generation) generate_transition_cells() (in module scmg.model.manifold_generation)

M

MLP (class in scmg.model.basic) MLPDenoiser (class in scmg.model.manifold_generation) module scmg scmg.model scmg.model.basic scmg.model.causal_prediction scmg.model.cell_type_search scmg.model.manifold_generation scmg.preprocessing

R

RecurrentBlock (class in scmg.model.manifold_generation)

S

scmg module scmg.model module scmg.model.basic module scmg.model.causal_prediction module

scmg.model.cell_type_search module scmg.model.manifold_generation module scmg.preprocessing module search_ref_cell() (scmg.model.cell_type_search.CellTypeSearcher method) search_ref_cell_types() (scmg.model.cell_type_search.CellTypeSearcher method) sinusoidal_embedding() (in module scmg.model.manifold_generation)

T

train_diffusion_model() (in module scmg.model.manifold_generation)